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gatY tagatose-1,6-bisphosphate aldolase 2 subunit GatY [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 946636, updated on 6-May-2021

Summary

Gene symbol
gatY
Gene description
tagatose-1,6-bisphosphate aldolase 2 subunit GatY
Primary source
ASAP:ABE-0006938
Locus tag
b2096
See related
ECOCYC:EG12419
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK2089; yegF
Summary
GatY is down 6X during growth at 4C (enabled by Oleispira antarctica Cpn10/60 transgene). kbaY, gatY, fbaA and ydjI are paralogs. [More information is available at EcoGene: EG12419].
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Genomic context

Sequence:
NC_000913.3 (2176350..2177204, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene galactitol-specific PTS enzyme IIA component Neighboring gene tagatose-1,6-bisphosphate aldolase 2 subunit GatZ Neighboring gene fructose-bisphosphate aldolase class I Neighboring gene putative transporter YegT Neighboring gene putative ADP-ribosylglycohydrolase YegU

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by GO

Function Evidence Code Pubs
enables aldehyde-lyase activity IEA
Inferred from Electronic Annotation
more info
 
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 
enables lyase activity IEA
Inferred from Electronic Annotation
more info
 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables tagatose-bisphosphate aldolase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables tagatose-bisphosphate aldolase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables tagatose-bisphosphate aldolase activity IEA
Inferred from Electronic Annotation
more info
 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
tagatose-1,6-bisphosphate aldolase 2 subunit GatY
NP_416599.2

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    2176350..2177204 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416599.2 tagatose-1,6-bisphosphate aldolase 2 subunit GatY [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_416599.2

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P0C8J6
    Conserved Domains (1) summary
    PRK09195
    Location:1284
    gatY; tagatose-bisphosphate aldolase; Reviewed
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