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yeaD putative aldose 1-epimerase YeaD [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 946572, updated on 6-May-2021

Summary

Gene symbol
yeaD
Gene description
putative aldose 1-epimerase YeaD
Primary source
ASAP:ABE-0005923
Locus tag
b1780
See related
ECOCYC:G6966
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1778; yzzQ
Summary
Downregulated twofold by GSNO in defined medium (aerobic). otherPDB (S. typhimurium): [More information is available at EcoGene: EG12679]. Sequence similarity suggests that YeaD may contain -barrel structure(s) . [More information is available at EcoCyc: G6966].
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Genomic context

Sequence:
NC_000913.3 (1863850..1864734)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene methionine sulfoxide reductase B Neighboring gene glyceraldehyde-3-phosphate dehydrogenase A Neighboring gene methylglyoxal reductase YeaE Neighboring gene MltA-interacting protein

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General gene information

Gene Ontology Provided by GO

Function Evidence Code Pubs
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
 
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 
enables glucose-6-phosphate 1-epimerase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables glucose-6-phosphate 1-epimerase activity IEA
Inferred from Electronic Annotation
more info
 
enables isomerase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within cellular response to DNA damage stimulus IEP
Inferred from Expression Pattern
more info
PubMed 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in cytosol IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
putative aldose 1-epimerase YeaD

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1863850..1864734
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416294.4 putative aldose 1-epimerase YeaD [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_416294.4

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P39173
    Conserved Domains (1) summary
    COG0676
    Location:3294
    YeaD; D-hexose-6-phosphate mutarotase [Carbohydrate transport and metabolism]
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