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fliR [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 946464, updated on 11-Sep-2024

Summary

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Official Symbol
fliR
Primary source
ECOCYC:EG11977
Locus tag
b1950
See related
ASAP:ABE-0006479
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1948; flaP
Summary
Flagellar regulon. [More information is available at EcoGene: EG11977]. FliR is one of six integral membrane components of the flagellar export apparatus . [More information is available at EcoCyc: EG11977].
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Genomic context

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Sequence:
NC_000913.3 (2022893..2023678)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene flagellar biosynthesis protein FliO Neighboring gene flagellar biosynthesis protein FliP Neighboring gene flagellar biosynthesis protein FliQ Neighboring gene DNA-binding transcriptional activator RcsA Neighboring gene protein DsrB

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The FliP and FliR proteins of Salmonella typhimurium, putative components of the type III flagellar export apparatus, are located in the flagellar basal body. Fan F, et al. Mol Microbiol, 1997 Dec. PMID 9426140
  2. Characterization of the fliL gene in the flagellar regulon of Escherichia coli and Salmonella typhimurium. Raha M, et al. J Bacteriol, 1994 Apr. PMID 8157599, Free PMC Article
  3. DNA sequence analysis, gene product identification, and localization of flagellar motor components of Escherichia coli. Malakooti J, et al. J Bacteriol, 1989 May. PMID 2651416, Free PMC Article
  4. Flagella-Driven Motility of Bacteria. Nakamura S, et al. Biomolecules, 2019 Jul 14. PMID 31337100, Free PMC Article
  5. The FliN-FliH interaction mediates localization of flagellar export ATPase FliI to the C ring complex. McMurry JL, et al. Biochemistry, 2006 Oct 3. PMID 17002279

See all (46) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Gene Ontology Provided by EcoCyc

Process Evidence Code Pubs
involved_in bacterial-type flagellum assembly IEA
Inferred from Electronic Annotation
more info
  
involved_in bacterial-type flagellum-dependent cell motility NAS
Non-traceable Author Statement
more info
 PubMed 
involved_in chemotaxis NAS
Non-traceable Author Statement
more info
 PubMed 
involved_in protein secretion by the type III secretion system NAS
Non-traceable Author Statement
more info
 PubMed 
involved_in protein targeting IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in bacterial-type flagellum IEA
Inferred from Electronic Annotation
more info
  
located_in bacterial-type flagellum NAS
Non-traceable Author Statement
more info
 PubMed 
located_in bacterial-type flagellum basal body IEA
Inferred from Electronic Annotation
more info
  
located_in bacterial-type flagellum secretion apparatus NAS
Non-traceable Author Statement
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  
part_of type III protein secretion system complex NAS
Non-traceable Author Statement
more info
 PubMed 

General protein information

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Preferred Names
flagellar biosynthesis protein FliR

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    2022893..2023678
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416460.1 flagellar biosynthesis protein FliR [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_416460.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8S7MUC5
    Conserved Domains (1) summary
    PRK05701
    Location:9 → 250
    fliR; flagellar type III secretion system protein FliR
Nucleotide Protein
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