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dnaQ DNA polymerase III subunit epsilon [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 946441, updated on 11-Oct-2018

Summary

Gene symbol
dnaQ
Gene description
DNA polymerase III subunit epsilon
Primary source
EcoGene:EG10243
Locus tag
b0215
See related
ASAP:ABE-0000722; ECOCYC:EG10243
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK0215; mutD
Summary
The epsilon subunit of DNA polymerase III catalyzes the 3' to 5' proofreading exonuclease activity of the holoenzyme . [More information is available at EcoCyc: EG10243].

Genomic context

Sequence:
NC_000913.3 (236067..236798)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene hydroxyacylglutathione hydrolase GloB Neighboring gene putative S-adenosyl-L-methionine-dependent methyltransferase Neighboring gene ribonuclease HI Neighboring gene tRNA Neighboring gene lipoprotein YafT

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Pathways from BioSystems

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by GO

Function Evidence Code Pubs
3'-5' exonuclease activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
exonuclease activity IDA
Inferred from Direct Assay
more info
PubMed 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
DNA replication proofreading IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
DNA replication proofreading IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
DNA polymerase III, core complex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
DNA polymerase III, core complex IDA
Inferred from Direct Assay
more info
PubMed 
cytosol IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
DNA polymerase III subunit epsilon
NP_414751.1

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    236067..236798
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_414751.1 DNA polymerase III subunit epsilon [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_414751.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P03007
    Conserved Domains (1) summary
    PRK05711
    Location:3243
    PRK05711; DNA polymerase III subunit epsilon; Provisional
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