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amyA alpha-amylase [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 946434, updated on 19-Sep-2024

Summary

Official Symbol
amyA
Official Full Name
alpha-amylase
Primary source
ECOCYC:EG11387
Locus tag
b1927
See related
ASAP:ABE-0006414
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1926; yedC
Summary
AmyA is a cytoplasmic -amylase. [More information is available at EcoCyc: EG11387].
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Genomic context

Sequence:
NC_000913.3 (2006156..2007643)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene flagellar biosynthesis protein FliS Neighboring gene flagellar biosynthesis protein FliT Neighboring gene lipoprotein YedD Neighboring gene putative selenium transporter YedE Neighboring gene putative sulfurtransferase YedF

General gene information

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables alpha-amylase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables alpha-amylase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables alpha-amylase activity IEA
Inferred from Electronic Annotation
more info
 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 
enables hydrolase activity, acting on glycosyl bonds IEA
Inferred from Electronic Annotation
more info
 
enables hydrolase activity, hydrolyzing O-glycosyl compounds IEA
Inferred from Electronic Annotation
more info
 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    2006156..2007643
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416437.1 alpha-amylase [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_416437.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A776LA02, A0A826IT68
    Conserved Domains (1) summary
    PRK09441
    Location:1490
    PRK09441; cytoplasmic alpha-amylase; Reviewed