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yebC putative transcriptional regulator YebC [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 946379, updated on 19-Sep-2024

Summary

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Official Symbol
yebC
Official Full Name
putative transcriptional regulator YebC
Primary source
ECOCYC:EG11137
Locus tag
b1864
See related
ASAP:ABE-0006219
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1865
Summary
YeeN and YebC are paralogs. [More information is available at EcoGene: EG11137]. A yebC null mutant grows normally at 37 C . [More information is available at EcoCyc: EG11137].
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Genomic context

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Sequence:
NC_000913.3 (1947411..1948151, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative papain-like amidase YebB Neighboring gene crossover junction endodeoxyribonuclease RuvC Neighboring gene dihydroneopterin triphosphate diphosphatase Neighboring gene aspartate--tRNA ligase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Resolution of Holliday junctions in Escherichia coli: identification of the ruvC gene product as a 19-kilodalton protein. Sharples GJ, et al. J Bacteriol, 1991 Dec. PMID 1657895, Free PMC Article
  2. Proteomics of Mycoplasma genitalium: identification and characterization of unannotated and atypical proteins in a small model genome. Balasubramanian S, et al. Nucleic Acids Res, 2000 Aug 15. PMID 10931922, Free PMC Article
  3. Molecular analysis of the Escherichia coli ruvC gene, which encodes a Holliday junction-specific endonuclease. Takahagi M, et al. J Bacteriol, 1991 Sep. PMID 1885548, Free PMC Article
  4. A new essential gene of the 'minimal genome' affecting cell division. Dassain M, et al. Biochimie, 1999 Aug-Sep. PMID 10572302
  5. A genome-based approach for the identification of essential bacterial genes. Arigoni F, et al. Nat Biotechnol, 1998 Sep. PMID 9743119

See all (17) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within response to ionizing radiation IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in cytosol IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
putative transcriptional regulator YebC

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1947411..1948151 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416378.1 putative transcriptional regulator YebC [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_416378.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8S0FSP3
    Conserved Domains (1) summary
    PRK00110
    Location:1 → 246
    PRK00110; YebC/PmpR family DNA-binding transcriptional regulator
Nucleotide Protein
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