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yeaR [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 946317, updated on 11-Sep-2024

Summary

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Official Symbol
yeaR
Primary source
ECOCYC:G6983
Locus tag
b1797
See related
ASAP:ABE-0005979
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1795
Summary
The yeaR-yoaG operon is nitrate regulated (Hsia-Yin, 2007). [More information is available at EcoGene: EG13504]. Transcription of yeaR is induced in response to nitrate, nitrite , and nitric oxide . [More information is available at EcoCyc: G6983].
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Genomic context

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Sequence:
NC_000913.3 (1879589..1879948, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene PF04226 family protein YeaQ Neighboring gene DUF1869 domain-containing protein YoaG Neighboring gene leucine exporter Neighboring gene DNA-binding transcriptional regulator DmlR

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Competition between NarL-dependent activation and Fis-dependent repression controls expression from the Escherichia coli yeaR and ogt promoters. Squire DJ, et al. Biochem J, 2009 May 13. PMID 19245365
  2. New genes implicated in the protection of anaerobically grown Escherichia coli against nitric oxide. Justino MC, et al. J Biol Chem, 2005 Jan 28. PMID 15546870
  3. A reassessment of the FNR regulon and transcriptomic analysis of the effects of nitrate, nitrite, NarXL, and NarQP as Escherichia coli K12 adapts from aerobic to anaerobic growth. Constantinidou C, et al. J Biol Chem, 2006 Feb 24. PMID 16377617
  4. Activation of yeaR-yoaG operon transcription by the nitrate-responsive regulator NarL is independent of oxygen- responsive regulator Fnr in Escherichia coli K-12. Lin HY, et al. J Bacteriol, 2007 Nov. PMID 17720788, Free PMC Article
  5. Identification of stress-related proteins in Escherichia coli using the pollutant cis-dichloroethylene. Lee J, et al. J Appl Microbiol, 2010 Jun. PMID 19919618

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General protein information

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Preferred Names
DUF1971 domain-containing protein YeaR

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1879589..1879948 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416311.1 DUF1971 domain-containing protein YeaR [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_416311.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A376M6M2
    Conserved Domains (1) summary
    COG3615
    Location:1 → 103
    TehB; Uncharacterized protein/domain, possibly involved in tellurite resistance [Function unknown]
Nucleotide Protein
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