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ynjH DUF1496 domain-containing protein YnjH [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 946279, updated on 3-Dec-2024

Summary

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Official Symbol
ynjH
Official Full Name
DUF1496 domain-containing protein YnjH
Primary source
ECOCYC:G6955
Locus tag
b1760
See related
ASAP:ABE-0005858
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1758
Summary
First 18 aa are predicted to be a type I signal peptide. [More information is available at EcoGene: EG14010]. The promoter of ynjH is predicted to be 28-dependent and can be transcribed by |FRAME: [More information is available at EcoCyc: G6955].
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Genomic context

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Sequence:
NC_000913.3 (1841863..1842135, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene molybdopterin synthase sulfurtransferase Neighboring gene CDP-alcohol phosphatidyltransferase domain-containing protein YnjF Neighboring gene 5-hydroxy-CTP diphosphatase Neighboring gene glutamate dehydrogenase Neighboring gene DUF1266 domain-containing protein YnjI

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. In silico prediction and functional validation of sigma28-regulated genes in Chlamydia and Escherichia coli. Yu HH, et al. J Bacteriol, 2006 Dec. PMID 16997971, Free PMC Article
  2. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
  3. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
  4. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503
  5. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Riley M, et al. Nucleic Acids Res, 2006. PMID 16397293, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
DUF1496 domain-containing protein YnjH

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1841863..1842135 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416274.1 DUF1496 domain-containing protein YnjH [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_416274.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A377A3A7
    Conserved Domains (1) summary
    pfam07383
    Location:47 → 89
    DUF1496; Protein of unknown function (DUF1496)
Nucleotide Protein
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