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torA trimethylamine N-oxide reductase 1 [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 946267, updated on 25-Jan-2024

Summary

Gene symbol
torA
Gene description
trimethylamine N-oxide reductase 1
Primary source
ASAP:ABE-0003372
Locus tag
b0997
See related
ECOCYC:EG11814
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK0988
Summary
Verified Tat substrate: [More information is available at EcoGene: EG11814]. TorA contains the active site and molybdenum cofactor . [More information is available at EcoCyc: EG11814].
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Genomic context

Sequence:
NC_000913.3 (1059256..1061802)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene periplasmic trimethylamine-N-oxide binding protein Neighboring gene DNA-binding transcriptional dual regulator TorR Neighboring gene cytochrome c menaquinol dehydrogenase TorC Neighboring gene trimethylamine-N-oxide reductase-specific chaperone Neighboring gene chaperone modulator CbpM Neighboring gene curved DNA-binding protein

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables electron transfer activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables electron transfer activity IDA
Inferred from Direct Assay
more info
PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
enables molybdenum ion binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables molybdenum ion binding IEA
Inferred from Electronic Annotation
more info
 
enables molybdopterin cofactor binding IDA
Inferred from Direct Assay
more info
PubMed 
enables molybdopterin cofactor binding IEA
Inferred from Electronic Annotation
more info
 
enables molybdopterin cofactor binding ISM
Inferred from Sequence Model
more info
PubMed 
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables trimethylamine-N-oxide reductase (cytochrome c) activity IDA
Inferred from Direct Assay
more info
PubMed 
enables trimethylamine-N-oxide reductase (cytochrome c) activity IEA
Inferred from Electronic Annotation
more info
 
enables trimethylamine-N-oxide reductase (cytochrome c) activity IMP
Inferred from Mutant Phenotype
more info
PubMed 
enables trimethylamine-N-oxide reductase activity IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
is_active_in outer membrane-bounded periplasmic space IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in outer membrane-bounded periplasmic space IDA
Inferred from Direct Assay
more info
PubMed 
located_in periplasmic space IEA
Inferred from Electronic Annotation
more info
 
part_of trimethylamine-N-oxide reductase (cytochrome c) complex IPI
Inferred from Physical Interaction
more info
PubMed 

General protein information

Preferred Names
trimethylamine N-oxide reductase 1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1059256..1061802
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415517.1 trimethylamine N-oxide reductase 1 [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415517.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A895NXR9
    Conserved Domains (1) summary
    PRK15102
    Location:10836
    PRK15102; trimethylamine-N-oxide reductase TorA