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ydiB quinate/shikimate dehydrogenase [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 946200, updated on 19-Sep-2024

Summary

Official Symbol
ydiB
Official Full Name
quinate/shikimate dehydrogenase
Primary source
ECOCYC:EG11234
Locus tag
b1692
See related
ASAP:ABE-0005651
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1690
Summary
YdiB is paralogous to AroE. [More information is available at EcoGene: EG11234]. The ydiB gene encodes a quinate/shikimate dehydrogenase . [More information is available at EcoCyc: EG11234].
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Genomic context

Sequence:
NC_000913.3 (1773789..1774655)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative exporter YdiM Neighboring gene putative transporter YdiN Neighboring gene 3-dehydroquinate dehydratase Neighboring gene putative acetate-CoA transferase YdiF

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables protein homodimerization activity IDA
Inferred from Direct Assay
more info
PubMed 
enables quinate 3-dehydrogenase (NAD+) activity IDA
Inferred from Direct Assay
more info
PubMed 
enables quinate 3-dehydrogenase (NAD+) activity IEA
Inferred from Electronic Annotation
more info
 
enables quinate 3-dehydrogenase (NADP+) activity IEA
Inferred from Electronic Annotation
more info
 
enables shikimate 3-dehydrogenase (NAD+) activity IDA
Inferred from Direct Assay
more info
PubMed 
enables shikimate 3-dehydrogenase (NAD+) activity IEA
Inferred from Electronic Annotation
more info
 
enables shikimate 3-dehydrogenase (NADP+) activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables shikimate 3-dehydrogenase (NADP+) activity IDA
Inferred from Direct Assay
more info
PubMed 
enables shikimate 3-dehydrogenase (NADP+) activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in amino acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 
involved_in aromatic amino acid family biosynthetic process IEA
Inferred from Electronic Annotation
more info
 
involved_in chorismate biosynthetic process IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in chorismate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 
involved_in shikimate metabolic process IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
quinate/shikimate dehydrogenase
NP_416207.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1773789..1774655
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416207.1 quinate/shikimate dehydrogenase [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_416207.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A376M9A9, A0A5B9AJI6
    Conserved Domains (1) summary
    PRK12749
    Location:1288
    PRK12749; quinate/shikimate dehydrogenase; Reviewed