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yafE [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 946197, updated on 24-Aug-2024

Summary

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Official Symbol
yafE
Primary source
ASAP:ABE-0000702
Locus tag
b0210
See related
ECOCYC:EG11651
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK0210
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Genomic context

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Sequence:
NC_000913.3 (231926..232549)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene methylglyoxal reductase DkgB Neighboring gene DNA-binding transcriptional regulator YafC Neighboring gene endonuclease/exonuclease/phosphatase domain-containing protein YafD Neighboring gene membrane-bound lytic murein transglycosylase D Neighboring gene hydroxyacylglutathione hydrolase GloB Neighboring gene protein YkfO

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The global transcriptional response of Escherichia coli to induced sigma 32 protein involves sigma 32 regulon activation followed by inactivation and degradation of sigma 32 in vivo. Zhao K, et al. J Biol Chem, 2005 May 6. PMID 15757896
  2. Regulon and promoter analysis of the E. coli heat-shock factor, sigma32, reveals a multifaceted cellular response to heat stress. Nonaka G, et al. Genes Dev, 2006 Jul 1. PMID 16818608, Free PMC Article
  3. Molecular cloning and DNA sequence of dniR, a gene affecting anaerobic expression of the Escherichia coli hexaheme nitrite reductase. Kajie S, et al. FEMS Microbiol Lett, 1991 Oct 1. PMID 1663890
  4. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
  5. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables S-adenosylmethionine-dependent methyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables methyltransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables methyltransferase activity IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
putative S-adenosylmethionine-dependent methyltransferase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    231926..232549
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_414746.1 putative S-adenosylmethionine-dependent methyltransferase [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_414746.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A376X4P1
    Conserved Domains (2) summary
    PRK08317
    Location:20 → 178
    PRK08317; hypothetical protein; Provisional
    pfam08241
    Location:7 → 96
    Methyltransf_11; Methyltransferase domain
Nucleotide Protein
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Gene LinkOut

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