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lsrC Autoinducer-2 ABC transporter membrane subunit LsrC [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 946105, updated on 3-Dec-2024
Official Symbol
lsrC
Official Full Name
Autoinducer-2 ABC transporter membrane subunit LsrC
Primary source
ECOCYC:G6801
Locus tag
b1514
See related
ASAP:ABE-0005059
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1507; ydeY
Summary
LsrC is paralogous to ribose transport membrane channel protein RbsC and is in an operon regulated by LsrR and LuxS, through AI-2. [More information is available at EcoGene: EG13807]. LsrC is a membrane component of a predicted ATP-dependent sugar transporter. [More information is available at EcoCyc: G6801].
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Sequence:
NC_000913.3 (1603019..1604047)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene autoinducer-2 kinase Neighboring gene DNA-binding transcriptional repressor LsrR Neighboring gene Autoinducer-2 ABC transporter ATP binding subunit Neighboring gene Autoinducer-2 ABC transporter membrane subunit LsrD Neighboring gene Autoinducer-2 ABC transporter periplasmic binding protein

Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. The LuxS-dependent autoinducer AI-2 controls the expression of an ABC transporter that functions in AI-2 uptake in Salmonella typhimurium. Taga ME, et al. Mol Microbiol, 2001 Nov. PMID 11722742
  2. Regulation of uptake and processing of the quorum-sensing autoinducer AI-2 in Escherichia coli. Xavier KB, et al. J Bacteriol, 2005 Jan. PMID 15601708, Free PMC Article
  3. Cyclic AMP (cAMP) and cAMP receptor protein influence both synthesis and uptake of extracellular autoinducer 2 in Escherichia coli. Wang L, et al. J Bacteriol, 2005 Mar. PMID 15743955, Free PMC Article
  4. Cell-to-cell signalling in Escherichia coli and Salmonella enterica. Ahmer BM. Mol Microbiol, 2004 May. PMID 15130116
  5. luxS-dependent gene regulation in Escherichia coli K-12 revealed by genomic expression profiling. Wang L, et al. J Bacteriol, 2005 Dec. PMID 16321939, Free PMC Article

See all (13) citations in PubMed

GeneRIFs: Gene References Into Functions

Products Interactant Other Gene Complex Source Pubs Description

Homology

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in autoinducer AI-2 transmembrane transport IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in autoinducer AI-2 transmembrane transport NAS
Non-traceable Author Statement
more info
 PubMed 
involved_in quorum sensing NAS
Non-traceable Author Statement
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing NAS
Non-traceable Author Statement
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in membrane NAS
Non-traceable Author Statement
more info
 PubMed 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  
Preferred Names
Autoinducer-2 ABC transporter membrane subunit LsrC
NP_416031.1

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1603019..1604047
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416031.1 Autoinducer-2 ABC transporter membrane subunit LsrC [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_416031.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A376JZE0
    Conserved Domains (1) summary
    PRK15432
    Location:1 → 342
    PRK15432; autoinducer 2 ABC transporter permease LsrC; Provisional
Nucleotide Protein
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