U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ydfD lysis protein [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 946102, updated on 17-Dec-2024

Summary

Go to the top of the page Help
Official Symbol
ydfD
Official Full Name
lysis protein
Primary source
ECOCYC:EG11303
Locus tag
b1576
See related
ASAP:ABE-0005262
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1570
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Sequence:
NC_000913.3 (1649794..1649985)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein YdfC Neighboring gene ncRNA Neighboring gene cell division inhibition protein DicB Neighboring gene pseudo Neighboring gene pseudo Neighboring gene pseudo

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. ydfD encodes a novel lytic protein in Escherichia coli. Masuda H, et al. FEMS Microbiol Lett, 2016 Mar. PMID 26887840, Free PMC Article
  2. Identification and sequence of gene dicB: translation of the division inhibitor from an in-phase internal start. Cam K, et al. Nucleic Acids Res, 1988 Jul 25. PMID 3041373, Free PMC Article
  3. A 570-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 28.0-40.1 min region on the linkage map. Aiba H, et al. DNA Res, 1996 Dec 31. PMID 9097039
  4. Prophages and bacterial genomics: what have we learned so far? Casjens S. Mol Microbiol, 2003 Jul. PMID 12886937
  5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by EcoCyc

Process Evidence Code Pubs
acts_upstream_of_or_within viral release from host cell by cytolysis IMP
Inferred from Mutant Phenotype
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
lysis protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1649794..1649985
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416093.1 lysis protein [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_416093.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A376K4L0
    Conserved Domains (1) summary
    pfam07358
    Location:4 → 61
    DUF1482; Protein of unknown function (DUF1482)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.