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ydeJ [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 946067, updated on 24-Aug-2024

Summary

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Official Symbol
ydeJ
Primary source
ASAP:ABE-0005131
Locus tag
b1537
See related
ECOCYC:EG11645
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1530
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Genomic context

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Sequence:
NC_000913.3 (1624773..1625291)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene diguanylate cyclase DgcZ Neighboring gene BOF family protein YdeI Neighboring gene peptidyl-dipeptidase Dcp Neighboring gene 3-hydroxy acid dehydrogenase YdfG

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and functional analysis of the multiple antibiotic resistance (mar) locus in Escherichia coli. Cohen SP, et al. J Bacteriol, 1993 Mar. PMID 8383113, Free PMC Article
  2. A 570-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 28.0-40.1 min region on the linkage map. Aiba H, et al. DNA Res, 1996 Dec 31. PMID 9097039
  3. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
  4. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
  5. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
PF02464 family protein YdeJ

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1624773..1625291
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416055.1 PF02464 family protein YdeJ [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_416055.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8T6BSE5
    Conserved Domains (1) summary
    PRK03657
    Location:6 → 162
    PRK03657; 2-oxo-tetronate isomerase
Nucleotide Protein
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Gene LinkOut

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