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ydeP putative oxidoreductase YdeP [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 946055, updated on 26-Mar-2025

Summary

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Official Symbol
ydeP
Official Full Name
putative oxidoreductase YdeP
Primary source
ECOCYC:G6791
Locus tag
b1501
See related
ASAP:ABE-0005001
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1494
Summary
EvgAS regulon. [More information is available at EcoGene: EG13798]. YdeP overproduction causes resistance to low pH , and a yhiE mutant lacks stationary phase resistance to low pH . [More information is available at EcoCyc: G6791].
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Genomic context

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Sequence:
NC_000913.3 (1584207..1586486, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene DNA-binding transcriptional dual regulator YdeO Neighboring gene two-component system connector SafA Neighboring gene putative fimbrial adhesin protein YdeQ Neighboring gene putative fimbrial protein YdeR

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Characterization of enteropathogenic Escherichia coli mutants that fail to disrupt host cell spreading and attachment to substratum. Nadler C, et al. Infect Immun, 2006 Feb. PMID 16428726, Free PMC Article
  2. Molecular mechanism of transcriptional cascade initiated by the EvgS/EvgA system in Escherichia coli K-12. Itou J, et al. Biosci Biotechnol Biochem, 2009 Apr 23. PMID 19352034
  3. B1500, a small membrane protein, connects the two-component systems EvgS/EvgA and PhoQ/PhoP in Escherichia coli. Eguchi Y, et al. Proc Natl Acad Sci U S A, 2007 Nov 20. PMID 17998538, Free PMC Article
  4. Molybdenum cofactor-dependent resistance to N-hydroxylated base analogs in Escherichia coli is independent of MobA function. Kozmin SG, et al. Mutat Res, 2007 Jun 1. PMID 17349664, Free PMC Article
  5. Regulatory network of acid resistance genes in Escherichia coli. Masuda N, et al. Mol Microbiol, 2003 May. PMID 12694615

See all (11) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables 4 iron, 4 sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
  
enables formate dehydrogenase (NAD+) activity IEA
Inferred from Electronic Annotation
more info
  
enables iron-sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
enables molybdenum ion binding IEA
Inferred from Electronic Annotation
more info
  
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within response to acidic pH EXP
Inferred from Experiment
more info
 PubMed 
acts_upstream_of_or_within response to acidic pH IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
is_active_in membrane IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
putative oxidoreductase YdeP

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1584207..1586486 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416018.1 putative oxidoreductase YdeP [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_416018.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8S7R556
    Conserved Domains (1) summary
    PRK09939
    Location:1 → 759
    PRK09939; acid resistance putative oxidoreductase YdeP
Nucleotide Protein
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