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sra [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 946030, updated on 24-Aug-2024

Summary

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Official Symbol
sra
Primary source
ASAP:ABE-0004935
Locus tag
b1480
See related
ECOCYC:EG11508
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1474; rpsV
Summary
Sra is a sub-stoichiometric component of the 30S ribosomal subunit that is more abundant at stationary phase than during log phase growth . [More information is available at EcoCyc: EG11508].
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Genomic context

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Sequence:
NC_000913.3 (1555826..1555963, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene ethanol dehydrogenase/alcohol dehydrogenase Neighboring gene malate dehydrogenase (oxaloacetate-decarboxylating) Neighboring gene biofilm-dependent modulation protein Neighboring gene osmotically inducible peroxiredoxin OsmC

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. High-fidelity mass analysis unveils heterogeneity in intact ribosomal particles. van de Waterbeemd M, et al. Nat Methods, 2017 Mar. PMID 28114288
  2. Analysis of Escherichia coli ribosomal proteins by an improved two dimensional gel electrophoresis. II. Characterization of four new proteins. Wada A. J Biochem, 1986 Dec. PMID 3553169
  3. RNA expression analysis using a 30 base pair resolution Escherichia coli genome array. Selinger DW, et al. Nat Biotechnol, 2000 Dec. PMID 11101804
  4. Osmotic regulation of the Escherichia coli bdm (biofilm-dependent modulation) gene by the RcsCDB His-Asp phosphorelay. Francez-Charlot A, et al. J Bacteriol, 2005 Jun. PMID 15901715, Free PMC Article
  5. Essentiality of ribosomal and transcription antitermination proteins analyzed by systematic gene replacement in Escherichia coli. Bubunenko M, et al. J Bacteriol, 2007 Apr. PMID 17277072, Free PMC Article

See all (18) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. N-terminus verified by Edman degradation on complete protein
    Title: Escherichia coli ribosome-associated protein SRA, whose copy number increases during stationary phase.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables ribosomal small subunit binding IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
located_in cytosol IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
ribosome-associated protein Sra

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1555826..1555963 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415997.1 ribosome-associated protein Sra [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415997.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A376LPB5
    Conserved Domains (1) summary
    PRK10057
    Location:1 → 44
    rpsV; stationary-phase-induced ribosome-associated protein
Nucleotide Protein
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