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ddpC putative D,D-dipeptide ABC transporter membrane subunit DdpC [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 946028, updated on 6-May-2021

Summary

Gene symbol
ddpC
Gene description
putative D,D-dipeptide ABC transporter membrane subunit DdpC
Primary source
ASAP:ABE-0004953
Locus tag
b1485
See related
ECOCYC:G6779
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1479; yddQ
Summary
Topology mapped using protein fusions. [More information is available at EcoGene: EG13788]. YddQ is a membrane component of a predicted peptide ABC transporter. [More information is available at EcoCyc: G6779].
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Genomic context

Sequence:
NC_000913.3 (1559014..1559910, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene osmotically inducible peroxiredoxin OsmC Neighboring gene putative D,D-dipeptide ABC transporter ATP-binding subunit DdpF Neighboring gene putative D,D-dipeptide ABC transporter ATP-binding subunit DdpD Neighboring gene putative D,D-dipeptide ABC transporter membrane subunit DdpB Neighboring gene putative D,D-dipeptide ABC transporter periplasmic binding protein Neighboring gene D-alanyl-D-alanine dipeptidase

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by GO

Function Evidence Code Pubs
enables dipeptide transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within dipeptide transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within peptide transport IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within protein transport IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within transmembrane transport ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
Component Evidence Code Pubs
part_of ATP-binding cassette (ABC) transporter complex RCA
inferred from Reviewed Computational Analysis
more info
PubMed 
located_in integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
located_in integral component of plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in integral component of plasma membrane ISM
Inferred from Sequence Model
more info
PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
putative D,D-dipeptide ABC transporter membrane subunit DdpC

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1559014..1559910 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416002.1 putative D,D-dipeptide ABC transporter membrane subunit DdpC [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_416002.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P77463
    Conserved Domains (1) summary
    PRK09881
    Location:1296
    PRK09881; D,D-dipeptide ABC transporter permease
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