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ydcS putative ABC transporter periplasmic binding protein/polyhydroxybutyrate synthase [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 946005, updated on 9-Mar-2022

Summary

Gene symbol
ydcS
Gene description
putative ABC transporter periplasmic binding protein/polyhydroxybutyrate synthase
Primary source
ASAP:ABE-0004803
Locus tag
b1440
See related
ECOCYC:G6751
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1434
Summary
YdcS was purified and characterized as a PHB synthase, however most PHB remains so there must be another synthase(s) (Dai, 2008). [More information is available at EcoGene: EG13762]. YdcS is a periplasmic binding protein of a predicted spermidine/putrescine ABC transporter. [More information is available at EcoCyc: G6751].
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Genomic context

Sequence:
NC_000913.3 (1511654..1512799)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene antitoxin of the HicA-HicB toxin-antitoxin system/ DNA-binding transcriptional repressor HicB Neighboring gene fused putative DNA-binding transcriptional regulator/putative aminotransferase YdcR Neighboring gene putative ABC transporter ATP-binding protein YdcT Neighboring gene putative ABC transporter membrane subunit YdcU Neighboring gene putative ABC transporter membrane subunit YdcV

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General protein information

Preferred Names
putative ABC transporter periplasmic binding protein/polyhydroxybutyrate synthase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1511654..1512799
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415957.1 putative ABC transporter periplasmic binding protein/polyhydroxybutyrate synthase [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415957.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P76108
    Conserved Domains (1) summary
    cd13588
    Location:36330
    PBP2_polyamine_1; The periplasmic-binding component of an uncharacterized ABC transporter involved in uptake of polyamines; contains the type 2 periplasmic binding fold