U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ycjY [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 945988, updated on 11-Sep-2024

Summary

Go to the top of the page Help
Official Symbol
ycjY
Primary source
ECOCYC:G6663
Locus tag
b1327
See related
ASAP:ABE-0004453
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1324
Summary
S9 peptidase family. [More information is available at EcoGene: EG13922].
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Sequence:
NC_000913.3 (1390933..1391853, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative uncharacterized protein YmjC Neighboring gene uncharacterized protein YmjD Neighboring gene DNA-binding transcriptional repressor PgrR Neighboring gene murein tripeptide ABC transporter periplasmic binding protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. MEROPS: the peptidase database. Rawlings ND, et al. Nucleic Acids Res, 2006 Jan 1. PMID 16381862, Free PMC Article
  2. Harnessing single cell sorting to identify cell division genes and regulators in bacteria. Burke C, et al. PLoS One, 2013. PMID 23565292, Free PMC Article
  3. A 570-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 28.0-40.1 min region on the linkage map. Aiba H, et al. DNA Res, 1996 Dec 31. PMID 9097039
  4. Evolution of enzymatic activities in the enolase superfamily: identification of the general acid catalyst in the active site of D-glucarate dehydratase from Escherichia coli. Gulick AM, et al. Biochemistry, 2001 Aug 28. PMID 11513584
  5. Interaction network containing conserved and essential protein complexes in Escherichia coli. Butland G, et al. Nature, 2005 Feb 3. PMID 15690043

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
  
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within cell division IMP
Inferred from Mutant Phenotype
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
putative hydrolase YcjY

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1390933..1391853 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415843.2 putative hydrolase YcjY [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415843.2

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A2X1IWP0
    Conserved Domains (1) summary
    COG1073
    Location:9 → 306
    FrsA; Fermentation-respiration switch protein FrsA, has esterase activity, DUF1100 family [Signal transduction mechanisms]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.