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ydeM putative anaerobic sulfatase maturation enzyme YdeM [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 945981, updated on 6-May-2021

Summary

Gene symbol
ydeM
Gene description
putative anaerobic sulfatase maturation enzyme YdeM
Primary source
ASAP:ABE-0004986
Locus tag
b1497
See related
ECOCYC:G6787
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1491
Summary
YdeM is a member of the anaerobic sulfatase maturation enzyme subfamily of the Radical SAM superfamily of enzymes . [More information is available at EcoCyc: G6787].
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Genomic context

Sequence:
NC_000913.3 (1579633..1580790, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative TonB-dependent receptor YddB Neighboring gene ABC transporter family protein YddA Neighboring gene protein YneP Neighboring gene putative sulfatase YdeN Neighboring gene DNA-binding transcriptional dual regulator YdeO

General gene information

Gene Ontology Provided by GO

Function Evidence Code Pubs
enables 4 iron, 4 sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
 
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 
enables iron-sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within cellular response to DNA damage stimulus IEP
Inferred from Expression Pattern
more info
PubMed 
acts_upstream_of_or_within protein maturation ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 

General protein information

Preferred Names
putative anaerobic sulfatase maturation enzyme YdeM

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1579633..1580790 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416014.4 putative anaerobic sulfatase maturation enzyme YdeM [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_416014.4

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P76134
    Conserved Domains (1) summary
    TIGR03942
    Location:2365
    sulfatase_rSAM; anaerobic sulfatase-maturating enzyme
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