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ydcU putative ABC transporter membrane subunit YdcU [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 945976, updated on 9-Mar-2022

Summary

Gene symbol
ydcU
Gene description
putative ABC transporter membrane subunit YdcU
Primary source
ASAP:ABE-0004807
Locus tag
b1442
See related
ECOCYC:G6753
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1436
Summary
Putative YdcVUTS ABC transport system. ydcU, potB and potH are paralogs. [More information is available at EcoGene: EG13764]. YdcU is a membrane component of a predicted spermidine/putrescine ABC transporter. [More information is available at EcoCyc: G6753].
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Genomic context

Sequence:
NC_000913.3 (1513831..1514772)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative ABC transporter periplasmic binding protein/polyhydroxybutyrate synthase Neighboring gene putative ABC transporter ATP-binding protein YdcT Neighboring gene putative ABC transporter membrane subunit YdcV Neighboring gene gamma-aminobutyraldehyde dehydrogenase Neighboring gene uncharacterized protein YncL

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by GO

Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
located_in integral component of plasma membrane ISM
Inferred from Sequence Model
more info
PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
putative ABC transporter membrane subunit YdcU

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1513831..1514772
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415959.1 putative ABC transporter membrane subunit YdcU [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415959.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P77156
    Conserved Domains (1) summary
    COG1176
    Location:39313
    PotB; ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism]