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ydeN [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 945957, updated on 24-Aug-2024

Summary

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Official Symbol
ydeN
Primary source
ASAP:ABE-0004988
Locus tag
b1498
See related
ECOCYC:G6788
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1492
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Genomic context

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Sequence:
NC_000913.3 (1580842..1582524, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene ABC transporter family protein YddA Neighboring gene protein YneP Neighboring gene putative anaerobic sulfatase maturation enzyme YdeM Neighboring gene DNA-binding transcriptional dual regulator YdeO Neighboring gene two-component system connector SafA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative immunological studies on arylsulfatase in bacteria of the family Enterobacteriaceae: occurrence of latent arylsulfatase protein regulated by sulfur compounds and tyramine. Yamada T, et al. J Bacteriol, 1978 Feb. PMID 415041, Free PMC Article
  2. A novel mucin-sulphatase activity found in Burkholderia cepacia and Pseudomonas aeruginosa. Jansen HJ, et al. J Med Microbiol, 1999 Jun. PMID 10359304
  3. Sulfatases: structure, mechanism, biological activity, inhibition, and synthetic utility. Hanson SR, et al. Angew Chem Int Ed Engl, 2004 Nov 5. PMID 15493058
  4. Computational analysis of bacterial sulfatases and their modifying enzymes. Schirmer A, et al. Chem Biol, 1998 Aug. PMID 9710560
  5. A 570-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 28.0-40.1 min region on the linkage map. Aiba H, et al. DNA Res, 1996 Dec 31. PMID 9097039

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables arylsulfatase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in outer membrane-bounded periplasmic space IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
putative sulfatase YdeN

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1580842..1582524 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416015.2 putative sulfatase YdeN [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_416015.2

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8G2HCA6
    Conserved Domains (1) summary
    COG3119
    Location:54 → 531
    AslA; Arylsulfatase A or related enzyme [Inorganic ion transport and metabolism]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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