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ydcV putative ABC transporter membrane subunit YdcV [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 945903, updated on 9-Mar-2022

Summary

Gene symbol
ydcV
Gene description
putative ABC transporter membrane subunit YdcV
Primary source
ASAP:ABE-0004809
Locus tag
b1443
See related
ECOCYC:G6754
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1437
Summary
Putative YdcVUTS ABC transport system. ydcV, potC and potI are paralogs. [More information is available at EcoGene: EG13765]. YdcV is a membrane component of a predicted spermidine/putrescine ABC transporter. [More information is available at EcoCyc: G6754].
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Genomic context

Sequence:
NC_000913.3 (1514762..1515556)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative ABC transporter periplasmic binding protein/polyhydroxybutyrate synthase Neighboring gene putative ABC transporter ATP-binding protein YdcT Neighboring gene putative ABC transporter membrane subunit YdcU Neighboring gene gamma-aminobutyraldehyde dehydrogenase Neighboring gene uncharacterized protein YncL

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by GO

Process Evidence Code Pubs
acts_upstream_of_or_within DNA import into cell involved in transformation IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
putative ABC transporter membrane subunit YdcV

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1514762..1515556
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415960.1 putative ABC transporter membrane subunit YdcV [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415960.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P0AFR9
    Conserved Domains (1) summary
    COG1177
    Location:5258
    PotC; ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism]