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ycjF DUF697 domain-containing inner membrane protein YcjF [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 945878, updated on 19-Nov-2025
Official Symbol
ycjF
Official Full Name
DUF697 domain-containing inner membrane protein YcjF
Primary source
ECOCYC:EG12870
Locus tag
b1322
See related
ASAP:ABE-0004436
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1318
Summary
The orthologue of YcjF from an Escherichia coli septicemia strain has been identified as an in vivo-induced gene expressed exclusively during disease in a mouse infection model. [More information is available at EcoCyc: EG12870].
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Sequence:
NC_000913.3 (1385511..1386572)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene outer membrane porin G Neighboring gene DNA-binding transcriptional repressor YcjW Neighboring gene DUF463 domain-containing protein YcjX Neighboring gene DNA-binding transcriptional dual regulator TyrR Neighboring gene lipid hydroperoxide peroxidase

Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Structure of the Escherichia coli K12 regulatory gene tyrR. Nucleotide sequence and sites of initiation of transcription and translation. Cornish EC, et al. J Biol Chem, 1986 Jan 5. PMID 3001057
  2. Interplay between the heat shock response and translation in Escherichia coli. Rasouly A, et al. Res Microbiol, 2009 May. PMID 19379808
  3. YbeY, a heat shock protein involved in translation in Escherichia coli. Rasouly A, et al. J Bacteriol, 2009 Apr. PMID 19181801, Free PMC Article
  4. Identification of Escherichia coli genes that are specifically expressed in a murine model of septicemic infection. Khan MA, et al. Infect Immun, 2002 Jul. PMID 12065479, Free PMC Article
  5. Detection of new genes in a bacterial genome using Markov models for three gene classes. Borodovsky M, et al. Nucleic Acids Res, 1995 Sep 11. PMID 7567469, Free PMC Article

See all (14) citations in PubMed

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by EcoCyc

Component Evidence Code Pubs
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  
Preferred Names
DUF697 domain-containing inner membrane protein YcjF

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1385511..1386572
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415838.1 DUF697 domain-containing inner membrane protein YcjF

    See identical proteins and their annotated locations for NP_415838.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    W1EYD4
    Conserved Domains (1) summary
    COG3768
    Location:4 → 352
    YcjF; Uncharacterized membrane protein YcjF, UPF0283 family [Function unknown]
Nucleotide Protein
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