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yciT DNA-binding transcriptional dual regulator YciT [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 945869, updated on 30-Jul-2025
Official Symbol
yciT
Official Full Name
DNA-binding transcriptional dual regulator YciT
Primary source
ECOCYC:G6638
Locus tag
b1284
See related
ASAP:ABE-0004312
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
deoT; ECK1279
Summary
AFMB Structural Genomics target Number 52 (http://afmb.cnrs-mrs.fr/article171.html). [More information is available at EcoGene: EG13905]. DeoT belongs to the DeoR family of transcriptional regulators and acts as a global regulator . [More information is available at EcoCyc: G6638].
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Sequence:
NC_000913.3 (1343597..1344346, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene orotidine-5'-phosphate decarboxylase Neighboring gene putative translation factor Neighboring gene osmotically-inducible lipoprotein OsmB Neighboring gene UPF0509 family protein YciZ Neighboring gene protein YmiD Neighboring gene cyclic di-GMP phosphodiesterase PdeR

Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Genome-wide screening of genes affecting glycogen metabolism in Escherichia coli K-12. Eydallin G, et al. FEBS Lett, 2007 Jun 26. PMID 17543954
  2. DeoT, a DeoR-type transcriptional regulator of multiple target genes. Elgrably-Weiss M, et al. FEMS Microbiol Lett, 2006 Jan. PMID 16451192
  3. The repertoire of DNA-binding transcriptional regulators in Escherichia coli K-12. Pérez-Rueda E, et al. Nucleic Acids Res, 2000 Apr 15. PMID 10734204, Free PMC Article
  4. Over 1000 genes are involved in the DNA damage response of Escherichia coli. Khil PP, et al. Mol Microbiol, 2002 Apr. PMID 11967071
  5. Phylogenetic distribution of DNA-binding transcription factors in bacteria and archaea. Pérez-Rueda E, et al. Comput Biol Chem, 2004 Dec. PMID 15556475

See all (11) citations in PubMed

GeneRIFs: Gene References Into Functions

Products Interactant Other Gene Complex Source Pubs Description

Homology

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
  
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
  
enables cis-regulatory region sequence-specific DNA binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables ligand-modulated transcription factor activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within DNA damage response IEP
Inferred from Expression Pattern
more info
 PubMed 
involved_in regulation of DNA-templated transcription IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within regulation of DNA-templated transcription IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IDA
Inferred from Direct Assay
more info
 PubMed 
Preferred Names
DNA-binding transcriptional dual regulator YciT

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1343597..1344346 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415800.1 DNA-binding transcriptional dual regulator YciT

    See identical proteins and their annotated locations for NP_415800.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A2W6NX32
    Conserved Domains (1) summary
    COG1349
    Location:1 → 248
    GlpR; DNA-binding transcriptional regulator of sugar metabolism, DeoR/GlpR family [Transcription, Carbohydrate transport and metabolism]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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