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sohB S49 peptidase family protein [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 945858, updated on 6-May-2021

Summary

Gene symbol
sohB
Gene description
S49 peptidase family protein
Primary source
ASAP:ABE-0004267
Locus tag
b1272
See related
ECOCYC:EG10956
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1266
Summary
SohB is homologous to inner membrane protease IV, which digests cleaved signal peptides. [More information is available at EcoGene: EG10956]. SohB might be a periplasmic protease, based on sequence analysis and the genetic interaction between sohB and htrA . [More information is available at EcoCyc: EG10956].
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Genomic context

Sequence:
NC_000913.3 (1329332..1330381)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene 23S rRNA pseudouridine(2605) synthase Neighboring gene cobinamide/cobalamin adenosyltransferase Neighboring gene putative oxidoreductase Neighboring gene protein YciN Neighboring gene DNA topoisomerase 1

General gene information

Gene Ontology Provided by GO

Function Evidence Code Pubs
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
 
enables peptidase activity IEA
Inferred from Electronic Annotation
more info
 
enables serine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 
enables serine-type peptidase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within proteolysis IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within proteolysis IGI
Inferred from Genetic Interaction
more info
PubMed 
Component Evidence Code Pubs
located_in integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
located_in integral component of plasma membrane RCA
inferred from Reviewed Computational Analysis
more info
PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
S49 peptidase family protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1329332..1330381
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415788.1 S49 peptidase family protein [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415788.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P0AG14
    Conserved Domains (1) summary
    PRK11778
    Location:3341
    PRK11778; putative inner membrane peptidase; Provisional
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