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ychH [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 945762, updated on 24-Aug-2024

Summary

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Official Symbol
ychH
Primary source
ECOCYC:EG11533
Locus tag
b1205
See related
ASAP:ABE-0004049
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1193
Summary
Two transmembrane helices predicted. [More information is available at EcoGene: EG11533]. CRP functions as a Class II activator at the ychH promoter . [More information is available at EcoCyc: EG11533].
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Genomic context

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Sequence:
NC_000913.3 (1258791..1259069)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene redox-responsive ATPase YchF Neighboring gene peptidyl-tRNA hydrolase Neighboring gene aerobic C4-dicarboxylate transporter DauA Neighboring gene ribose-phosphate diphosphokinase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Open reading frames flanking the peptidyl-tRNA hydrolase-encoding gene of Escherichia coli. Galindo JM, et al. Gene, 1994 Dec 30. PMID 7828865
  2. Peptidyl-tRNA hydrolase is involved in lambda inhibition of host protein synthesis. García-Villegas MR, et al. EMBO J, 1991 Nov. PMID 1833189, Free PMC Article
  3. New targets for the cyclic AMP receptor protein in the Escherichia coli K-12 genome. Hollands K, et al. FEMS Microbiol Lett, 2007 Sep. PMID 17608696
  4. Identification of stress-related proteins in Escherichia coli using the pollutant cis-dichloroethylene. Lee J, et al. J Appl Microbiol, 2010 Jun. PMID 19919618
  5. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Gene Ontology Provided by EcoCyc

Process Evidence Code Pubs
acts_upstream_of_or_within cellular response to cadmium ion IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within cellular response to hydrogen peroxide IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within single-species biofilm formation on inanimate substrate IMP
Inferred from Mutant Phenotype
more info
 PubMed 

General protein information

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Preferred Names
stress-induced protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1258791..1259069
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415723.1 stress-induced protein [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415723.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P0AB49
    Conserved Domains (1) summary
    PRK10692
    Location:1 → 92
    PRK10692; stress response protein YchH
Nucleotide Protein
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