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bluR [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 945735, updated on 11-Sep-2024

Summary

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Official Symbol
bluR
Primary source
ECOCYC:G6602
Locus tag
b1162
See related
ASAP:ABE-0003900
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1149; ycgE
Summary
YcgE has a MerR-like HTH DNA binding domain. [More information is available at EcoGene: EG13886].
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Genomic context

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Sequence:
NC_000913.3 (1213328..1214059, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene protein YmgL Neighboring gene DUF1398 domain-containing protein YcgX Neighboring gene blue light- and temperature-regulated antirepressor BluF Neighboring gene putative two-component system connector protein YcgZ

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic dissection of signaling through the Rcs phosphorelay. Majdalani N, et al. Methods Enzymol, 2007. PMID 17609140
  2. 5-Fluorouracil reduces biofilm formation in Escherichia coli K-12 through global regulator AriR as an antivirulence compound. Attila C, et al. Appl Microbiol Biotechnol, 2009 Mar. PMID 19172264
  3. Genome-wide identification of H-NS-controlled, temperature-regulated genes in Escherichia coli K-12. White-Ziegler CA, et al. J Bacteriol, 2009 Feb. PMID 19011022, Free PMC Article
  4. RegulonDB (version 6.0): gene regulation model of Escherichia coli K-12 beyond transcription, active (experimental) annotated promoters and Textpresso navigation. Gama-Castro S, et al. Nucleic Acids Res, 2008 Jan. PMID 18158297, Free PMC Article
  5. Low temperature (23 degrees C) increases expression of biofilm-, cold-shock- and RpoS-dependent genes in Escherichia coli K-12. White-Ziegler CA, et al. Microbiology (Reading), 2008 Jan. PMID 18174134

See all (14) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
  
enables DNA-binding transcription factor activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
  
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within negative regulation of DNA-templated transcription IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
DNA-binding transcriptional repressor BluR

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1213328..1214059 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415680.1 DNA-binding transcriptional repressor BluR [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415680.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A6M9QQC6
    Conserved Domains (1) summary
    PRK15043
    Location:1 → 239
    PRK15043; HTH-type transcriptional regulator MlrA
Nucleotide Protein
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