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potC spermidine/putrescine ABC transporter permease [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 945691, updated on 9-Sep-2018

Summary

Gene symbol
potC
Gene description
spermidine/putrescine ABC transporter permease
Primary source
EcoGene:EG10751
Locus tag
b1124
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1110; JW1110
Summary
PotBCAD spermidine/putrescine ABC transport system. [More information is available at EcoGene: EG10751]. PotABCD is an ATP-dependent polyamine transporter that is a member of the ATP-Binding Cassette (ABC) Superfamily of transporters . [More information is available at EcoCyc: EG10751].

Genomic context

Sequence:
NC_000913.3 (1182826..1183620, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene deacetylase of acs and cheY, chemotaxis regulator Neighboring gene inner membrane protein Neighboring gene DUF3592 family inner membrane protein Neighboring gene spermidine/putrescine ABC transporter periplasmic binding protein Neighboring gene spermidine/putrescine ABC transporter permease Neighboring gene spermidine/putrescine ABC transporter ATPase Neighboring gene peptidase T

Pathways from BioSystems

  • ABC transporters, organism-specific biosystem (from KEGG)
    ABC transporters, organism-specific biosystemThe ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of ...
  • ABC transporters, conserved biosystem (from KEGG)
    ABC transporters, conserved biosystemThe ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of ...
  • Spermidine/putrescine transport system, organism-specific biosystem (from KEGG)
    Spermidine/putrescine transport system, organism-specific biosystemStructural complex; Environmental information processing; Mineral and organic ion transport system
  • Spermidine/putrescine transport system, conserved biosystem (from KEGG)
    Spermidine/putrescine transport system, conserved biosystemStructural complex; Environmental information processing; Mineral and organic ion transport system

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by GO

Function Evidence Code Pubs
spermidine-importing ATPase activity IDA
Inferred from Direct Assay
more info
PubMed 
Process Evidence Code Pubs
putrescine transport IDA
Inferred from Direct Assay
more info
PubMed 
spermidine transmembrane transport IDA
Inferred from Direct Assay
more info
PubMed 
spermidine transmembrane transport IGI
Inferred from Genetic Interaction
more info
PubMed 
Component Evidence Code Pubs
ATP-binding cassette (ABC) transporter complex TAS
Traceable Author Statement
more info
PubMed 
integral component of plasma membrane ISM
Inferred from Sequence Model
more info
PubMed 
plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Names
spermidine/putrescine ABC transporter permease
NP_415642.1
  • spermidine/putrescine transport system permease; membrane component of ABC superfamily

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1182826..1183620 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415642.1 spermidine/putrescine ABC transporter permease [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415642.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P0AFK6
    Conserved Domains (1) summary
    PRK09500
    Location:2257
    potC; spermidine/putrescine ABC transporter membrane protein; Reviewed
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