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nudJ phosphatase NudJ [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 945689, updated on 3-Dec-2024

Summary

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Official Symbol
nudJ
Official Full Name
phosphatase NudJ
Primary source
ECOCYC:G6580
Locus tag
b1134
See related
ASAP:ABE-0003818
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1120; ymfB
Summary
Nudix hydrolase. [More information is available at EcoGene: EG13446]. The nudJ gene product is a member of the Nudix hydrolase superfamily. [More information is available at EcoCyc: G6580].
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Genomic context

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Sequence:
NC_000913.3 (1193827..1194288, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene lysogenization regulator Neighboring gene tRNA-specific 2-thiouridylase Neighboring gene 23S rRNA pseudouridine(2457) synthase Neighboring gene isocitrate dehydrogenase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Crystallization and preliminary diffraction studies of Nudix hydrolase YmfB from Escherichia coli K-1. Hong MK, et al. Protein Pept Lett, 2009. PMID 19149682
  2. Biosynthesis and Activity of Prenylated FMN Cofactors. Wang PH, et al. Cell Chem Biol, 2018 May 17. PMID 29551348
  3. Three new Nudix hydrolases from Escherichia coli. Xu W, et al. J Biol Chem, 2006 Aug 11. PMID 16766526
  4. A genetic screen for the identification of thiamin metabolic genes. Lawhorn BG, et al. J Biol Chem, 2004 Oct 15. PMID 15292217
  5. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables 4-amino-5-hydroxymethyl-2-methylpyrimidine diphosphatase activity IEA
Inferred from Electronic Annotation
more info
  
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
  
enables nucleoside diphosphate phosphatase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables nucleoside diphosphate phosphatase activity IEA
Inferred from Electronic Annotation
more info
  
enables pyrophosphatase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables ribonucleoside triphosphate phosphatase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables ribonucleoside triphosphate phosphatase activity IEA
Inferred from Electronic Annotation
more info
  
enables thiamine diphosphate phosphatase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables thiamine diphosphate phosphatase activity IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
phosphatase NudJ
NP_415652.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1193827..1194288 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415652.1 phosphatase NudJ [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415652.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A418GAI7
    Conserved Domains (1) summary
    cd03675
    Location:6 → 137
    Nudix_Hydrolase_2; Contains a crystal structure of the Nudix hydrolase from Nitrosomonas europaea, which has an unknown function. In general, members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes ...
Nucleotide Protein
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