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hyaC hydrogenase 1 cytochrome b subunit [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 945581, updated on 6-May-2021

Summary

Gene symbol
hyaC
Gene description
hydrogenase 1 cytochrome b subunit
Primary source
ASAP:ABE-0003290
Locus tag
b0974
See related
ECOCYC:EG10470
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
cybH; ECK0965
Summary
The hyaC gene product is very hydrophobic, rich in aromatic residues, and has four putative hydrophobic membrane-spanning regions . [More information is available at EcoCyc: EG10470].
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Genomic context

Sequence:
NC_000913.3 (1035066..1035773)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene tRNA Neighboring gene hydrogenase 1 small subunit Neighboring gene hydrogenase 1 large subunit Neighboring gene putative hydrogenase 1 maturation protease HyaD Neighboring gene putative HyaA chaperone Neighboring gene protein HyaF Neighboring gene cytochrome bd-II ubiquinol oxidase subunit I

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by GO

Function Evidence Code Pubs
enables electron transfer activity IEA
Inferred from Electronic Annotation
more info
 
enables heme binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables heme binding IDA
Inferred from Direct Assay
more info
PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within anaerobic respiration IEP
Inferred from Expression Pattern
more info
PubMed 
acts_upstream_of_or_within fermentation IEP
Inferred from Expression Pattern
more info
PubMed 
acts_upstream_of_or_within respiratory electron transport chain IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
part_of [Ni-Fe] hydrogenase complex IDA
Inferred from Direct Assay
more info
PubMed 
located_in integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
is_active_in integral component of plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in integral component of plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in integral component of plasma membrane ISM
Inferred from Sequence Model
more info
PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
hydrogenase 1 cytochrome b subunit
NP_415493.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1035066..1035773
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415493.1 hydrogenase 1 cytochrome b subunit [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415493.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P0AAM1
    Conserved Domains (1) summary
    PRK10171
    Location:1235
    PRK10171; Ni/Fe-hydrogenase b-type cytochrome subunit
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