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hyaA hydrogenase 1 small subunit [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 945579, updated on 6-May-2021

Summary

Gene symbol
hyaA
Gene description
hydrogenase 1 small subunit
Primary source
ASAP:ABE-0003286
Locus tag
b0972
See related
ECOCYC:EG10468
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK0963
Summary
Verified Tat substrate: [More information is available at EcoGene: EG10468]. HyaA is the small subunit of hydrogenase 1. [More information is available at EcoCyc: EG10468].
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Genomic context

Sequence:
NC_000913.3 (1032139..1033257)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene modulator of FtsH protease Neighboring gene tRNA Neighboring gene hydrogenase 1 large subunit Neighboring gene hydrogenase 1 cytochrome b subunit Neighboring gene putative hydrogenase 1 maturation protease HyaD Neighboring gene putative HyaA chaperone Neighboring gene protein HyaF

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by GO

Function Evidence Code Pubs
enables 3 iron, 4 sulfur cluster binding IDA
Inferred from Direct Assay
more info
PubMed 
enables 3 iron, 4 sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
 
enables 4 iron, 4 sulfur cluster binding IDA
Inferred from Direct Assay
more info
PubMed 
enables 4 iron, 4 sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
 
enables electron transfer activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables electron transfer activity IDA
Inferred from Direct Assay
more info
PubMed 
enables ferredoxin hydrogenase activity IEA
Inferred from Electronic Annotation
more info
 
enables hydrogenase (acceptor) activity IEA
Inferred from Electronic Annotation
more info
 
enables iron-sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
involved_in anaerobic respiration IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
acts_upstream_of_or_within anaerobic respiration IEP
Inferred from Expression Pattern
more info
PubMed 
acts_upstream_of_or_within electron transport chain IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within fermentation IEP
Inferred from Expression Pattern
more info
PubMed 
Component Evidence Code Pubs
part_of [Ni-Fe] hydrogenase complex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
part_of [Ni-Fe] hydrogenase complex IDA
Inferred from Direct Assay
more info
PubMed 
part_of [Ni-Fe] hydrogenase complex RCA
inferred from Reviewed Computational Analysis
more info
PubMed 
part_of ferredoxin hydrogenase complex IEA
Inferred from Electronic Annotation
more info
 
located_in integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
located_in integral component of membrane ISM
Inferred from Sequence Model
more info
PubMed 
located_in integral component of plasma membrane RCA
inferred from Reviewed Computational Analysis
more info
PubMed 
located_in intrinsic component of periplasmic side of plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
hydrogenase 1 small subunit
NP_415491.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1032139..1033257
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415491.1 hydrogenase 1 small subunit [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415491.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P69739
    Conserved Domains (1) summary
    TIGR00391
    Location:2360
    hydA; hydrogenase (NiFe) small subunit (hydA)
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