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hyaD [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 945575, updated on 11-Sep-2024

Summary

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Official Symbol
hyaD
Primary source
ECOCYC:EG10471
Locus tag
b0975
See related
ASAP:ABE-0003292
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK0966
Summary
The HyaD protein is required for the synthesis of active hydrogenase isoenzyme 1 (HYD1) . [More information is available at EcoCyc: EG10471].
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Genomic context

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Sequence:
NC_000913.3 (1035770..1036357)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene tRNA-Ser Neighboring gene hydrogenase 1 small subunit Neighboring gene hydrogenase 1 large subunit Neighboring gene hydrogenase 1 cytochrome b subunit Neighboring gene putative HyaA chaperone Neighboring gene protein HyaF Neighboring gene cytochrome bd-II subunit 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Cloning and sequencing of a putative Escherichia coli [NiFe] hydrogenase-1 operon containing six open reading frames. Menon NK, et al. J Bacteriol, 1990 Apr. PMID 2180913, Free PMC Article
  2. Effects of sigmaS and the transcriptional activator AppY on induction of the Escherichia coli hya and cbdAB-appA operons in response to carbon and phosphate starvation. Atlung T, et al. J Bacteriol, 1997 Apr. PMID 9079897, Free PMC Article
  3. Crystal structure of the hydrogenase maturating endopeptidase HYBD from Escherichia coli. Fritsche E, et al. J Mol Biol, 1999 May 21. PMID 10331925
  4. Mutational analysis and characterization of the Escherichia coli hya operon, which encodes [NiFe] hydrogenase 1. Menon NK, et al. J Bacteriol, 1991 Aug. PMID 1856178, Free PMC Article
  5. Effects of mutations in the rpoS gene on cell viability and global gene expression under nitrogen starvation in Escherichia coli. Kabir MS, et al. Microbiology (Reading), 2004 Aug. PMID 15289551

See all (14) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables aspartic-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
  
enables endopeptidase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables enzyme activator activity IEA
Inferred from Electronic Annotation
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
enables peptidase activity IEA
Inferred from Electronic Annotation
more info
  
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein processing IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in protein processing IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within protein processing IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
putative hydrogenase 1 maturation protease HyaD

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1035770..1036357
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415494.1 putative hydrogenase 1 maturation protease HyaD [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415494.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A377AUT7
    Conserved Domains (1) summary
    PRK10264
    Location:1 → 195
    PRK10264; hydrogenase 1 maturation protease; Provisional
Nucleotide Protein
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