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rarA replication-associated recombination protein A [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 945505, updated on 6-May-2021

Summary

Gene symbol
rarA
Gene description
replication-associated recombination protein A
Primary source
ASAP:ABE-0003034
Locus tag
b0892
See related
ECOCYC:EG12690
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK0883; mgsA; ycaJ
Summary
AFMB Structural Genomics target Number 8 (http://afmb.cnrs-mrs.fr/article171. [More information is available at EcoGene: EG12690]. The RarA protein may play a role in recombination associated with DNA replication. [More information is available at EcoCyc: EG12690].
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Genomic context

Sequence:
NC_000913.3 (937994..939337)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene cell division DNA translocase FtsK Neighboring gene outer membrane lipoprotein carrier protein Neighboring gene serine--tRNA ligase Neighboring gene dimethyl sulfoxide reductase subunit A

General gene information

Gene Ontology Provided by GO

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 
enables enzyme activator activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables nucleotide binding IEA
Inferred from Electronic Annotation
more info
 
enables single-stranded DNA helicase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within DNA recombination IGI
Inferred from Genetic Interaction
more info
PubMed 
acts_upstream_of_or_within DNA replication IEA
Inferred from Electronic Annotation
more info
 
involved_in DNA-dependent DNA replication IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
acts_upstream_of_or_within DNA-dependent DNA replication IGI
Inferred from Genetic Interaction
more info
PubMed 
acts_upstream_of_or_within positive regulation of catalytic activity IEA
Inferred from Electronic Annotation
more info
 
involved_in regulation of DNA repair IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
part_of replisome IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
replication-associated recombination protein A

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    937994..939337
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415412.1 replication-associated recombination protein A [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415412.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P0AAZ4
    Conserved Domains (1) summary
    PRK13342
    Location:15439
    PRK13342; recombination factor protein RarA; Reviewed
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