U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ybiT putative ATP-binding protein YbiT [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 945440, updated on 26-Mar-2025
Official Symbol
ybiT
Official Full Name
putative ATP-binding protein YbiT
Primary source
ECOCYC:G6423
Locus tag
b0820
See related
ASAP:ABE-0002801
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK0810
Summary
E. chrysanthemi ortholog plays a role in planta infective fitness. [More information is available at EcoGene: EG13325]. YbiT is predicted to be an ABC transporter protein . [More information is available at EcoCyc: G6423].
NEW
Try the new Gene table
Try the new Transcript table
Sequence:
NC_000913.3 (855963..857555)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene DNA-binding transcriptional dual regulator MntR Neighboring gene putative transporter YbiR Neighboring gene L,D-transpeptidase LdtB Neighboring gene DUF1479 domain-containing protein YbiU Neighboring gene sugar phosphatase YbiV

Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. The ybiT gene of Erwinia chrysanthemi codes for a putative ABC transporter and is involved in competitiveness against endophytic bacteria during infection. Llama-Palacios A, et al. Appl Environ Microbiol, 2002 Apr. PMID 11916677, Free PMC Article
  2. Genome-wide transcriptional analysis of the cold shock response in wild-type and cold-sensitive, quadruple-csp-deletion strains of Escherichia coli. Phadtare S, et al. J Bacteriol, 2004 Oct. PMID 15466053, Free PMC Article
  3. From the genome sequence to the proteome and back: evaluation of E. coli genome annotation with a 2-D gel-based proteomics approach. Maillet I, et al. Proteomics, 2007 Apr. PMID 17366475
  4. Global analysis of candidate genes important for fitness in a competitive biofilm using DNA-array-based transposon mapping. Junker LM, et al. Microbiology (Reading), 2006 Aug. PMID 16849790
  5. The Escherichia coli ATP-binding cassette (ABC) proteins. Linton KJ, et al. Mol Microbiol, 1998 Apr. PMID 9593292

See all (11) citations in PubMed

GeneRIFs: Gene References Into Functions

Products Interactant Other Gene Complex Source Pubs Description

Homology

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables ATP binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables ATP binding RCA
inferred from Reviewed Computational Analysis
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
  
enables nucleotide binding IEA
Inferred from Electronic Annotation
more info
  
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Preferred Names
putative ATP-binding protein YbiT

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    855963..857555
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415341.1 putative ATP-binding protein YbiT [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415341.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A7A6MMK1
    Conserved Domains (1) summary
    PRK15064
    Location:1 → 530
    PRK15064; ABC transporter ATP-binding protein; Provisional
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.