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ybiR putative transporter YbiR [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 945438, updated on 10-Oct-2019

Summary

Gene symbol
ybiR
Gene description
putative transporter YbiR
Primary source
EcoGene:EG13323
Locus tag
b0818
See related
ASAP:ABE-0002795; ECOCYC:G6421
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK0808
Summary
IT (Ion Transporter) superfamily (Prakash, 2003). [More information is available at EcoGene: EG13323]. Expression of ybiR was reduced in response to cold shock . [More information is available at EcoCyc: G6421].

Genomic context

Sequence:
NC_000913.3 (853647..854765)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene phosphoethanolamine transferase Neighboring gene ncRNA Neighboring gene small protein MntS Neighboring gene DNA-binding transcriptional dual regulator MntR Neighboring gene L,D-transpeptidase YbiS Neighboring gene ABC transporter ATP-binding protein YbiT

General gene information

Gene Ontology Provided by GO

Process Evidence Code Pubs
transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
membrane IEA
Inferred from Electronic Annotation
more info
 
plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
plasma membrane IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    853647..854765
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415339.1 putative transporter YbiR [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415339.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P75788
    Conserved Domains (1) summary
    cd01117
    Location:8366
    YbiR_permease; Putative anion permease YbiR. Based on sequence similarity, YbiR proteins are predicted to function as anion translocating permeases in eubacteria, archaea and plants. They belong to ArsB/NhaD superfamily of permeases that have been shown to translocate ...
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