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ybiV sugar phosphatase YbiV [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 945432, updated on 9-Mar-2022

Summary

Gene symbol
ybiV
Gene description
sugar phosphatase YbiV
Primary source
ASAP:ABE-0002807
Locus tag
b0822
See related
ECOCYC:G6425
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK0812
Summary
HAD superfamily. [More information is available at EcoGene: EG13327]. YbiV is a sugar phosphatase belonging to the family of type II haloacid dehalogenase (HAD)-like hydrolases . [More information is available at EcoCyc: G6425].
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Genomic context

Sequence:
NC_000913.3 (859213..860028, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative ATP-binding protein YbiT Neighboring gene DUF1479 domain-containing protein YbiU Neighboring gene putative pyruvate formate lyase Neighboring gene putative pyruvate formate-lyase activating enzyme YbiY

General gene information

Gene Ontology Provided by GO

Function Evidence Code Pubs
enables fructose-1-phosphatase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
 
enables magnesium ion binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables magnesium ion binding IDA
Inferred from Direct Assay
more info
PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
enables phosphatase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables sorbitol-6-phosphatase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables sugar-phosphatase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables sugar-phosphatase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in dephosphorylation IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
sugar phosphatase YbiV
NP_415343.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    859213..860028 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415343.1 sugar phosphatase YbiV [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415343.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P75792
    Conserved Domains (1) summary
    cd07518
    Location:4260
    HAD_YbiV-Like; Escherichia coli YbiV sugar phosphatase/phosphotransferase and related proteins; belongs to the haloacid dehalogenase-like superfamily