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lsrB Autoinducer-2 ABC transporter periplasmic binding protein [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 945418, updated on 6-May-2021

Summary

Gene symbol
lsrB
Gene description
Autoinducer-2 ABC transporter periplasmic binding protein
Primary source
ASAP:ABE-0005063
Locus tag
b1516
See related
ECOCYC:G6803
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1509; yneA
Summary
Salmonella LsrB binds a chemically distinct form of the AI-2 signal, (2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran (R-THMF), that lacks the boron found in Vibrio AI-2. [More information is available at EcoGene: EG13809]. LsrB is a periplasmic binding protein of a predicted ATP-dependent sugar transporter. [More information is available at EcoCyc: G6803].
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Genomic context

Sequence:
NC_000913.3 (1605051..1606073)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene Autoinducer-2 ABC transporter ATP binding subunit Neighboring gene Autoinducer-2 ABC transporter membrane subunit LsrC Neighboring gene Autoinducer-2 ABC transporter membrane subunit LsrD Neighboring gene 3-hydroxy-2,4-pentadione 5-phosphate thiolase Neighboring gene (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General protein information

Preferred Names
Autoinducer-2 ABC transporter periplasmic binding protein
NP_416033.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1605051..1606073
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416033.1 Autoinducer-2 ABC transporter periplasmic binding protein [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_416033.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P76142
    Conserved Domains (1) summary
    PRK15408
    Location:5340
    PRK15408; autoinducer 2 ABC transporter substrate-binding protein LsrB
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