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ybhS ABC exporter membrane subunit YbhS [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 945411, updated on 6-May-2021

Summary

Gene symbol
ybhS
Gene description
ABC exporter membrane subunit YbhS
Primary source
ASAP:ABE-0002703
Locus tag
b0793
See related
ECOCYC:G6410
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK0782
Summary
The putative ybiHybhGFSR operon encodes the YbhG putative membrane fusion protein of efflux pumps. ybhS is paralogous to ybhR, yhhJ, and rbbA. [More information is available at EcoGene: EG13675]. YbhS is a membrane component of a predicted ATP-dependent efflux pump. [More information is available at EcoCyc: G6410].
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Genomic context

Sequence:
NC_000913.3 (826119..827252, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene cardiolipin synthase B Neighboring gene endonuclease/exonuclease/phosphatase domain-containing protein YbhP Neighboring gene putative inner membrane protein Neighboring gene ABC exporter membrane subunit YbhR Neighboring gene ABC exporter ATP binding subunit YbhF Neighboring gene HlyD_D23 family protein YbhG Neighboring gene DNA-binding transcriptional dual regulator CecR

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by GO

Function Evidence Code Pubs
enables efflux transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables efflux transmembrane transporter activity IGI
Inferred from Genetic Interaction
more info
PubMed 
enables transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
part_of ATP-binding cassette (ABC) transporter complex IEA
Inferred from Electronic Annotation
more info
 
located_in integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
located_in integral component of plasma membrane ISM
Inferred from Sequence Model
more info
PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
ABC exporter membrane subunit YbhS
NP_415314.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    826119..827252 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415314.1 ABC exporter membrane subunit YbhS [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415314.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P0AFQ2
    Conserved Domains (1) summary
    NF033858
    Location:7334
    ABC2_perm_RbbA; ribosome-associated ATPase/putative transporter RbbA
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