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cueR DNA-binding transcriptional dual regulator CueR [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 945332, updated on 19-Sep-2024

Summary

Official Symbol
cueR
Official Full Name
DNA-binding transcriptional dual regulator CueR
Primary source
ECOCYC:G6263
Locus tag
b0487
See related
ASAP:ABE-0001693
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
copR; ECK0481; ybbI
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Genomic context

Sequence:
NC_000913.3 (513993..514400)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene glutaminase 1 Neighboring gene putative transporter YbaT Neighboring gene NfeD-like family protein YbbJ Neighboring gene PHB domain-containing protein QmcA Neighboring gene putative iron ABC exporter ATP-binding subunit FetA Neighboring gene putative iron ABC exporter membrane subunit FetB

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General gene information

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 
enables DNA-binding transcription activator activity IPI
Inferred from Physical Interaction
more info
PubMed 
enables DNA-binding transcription factor activity IDA
Inferred from Direct Assay
more info
PubMed 
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 
enables cis-regulatory region sequence-specific DNA binding IDA
Inferred from Direct Assay
more info
PubMed 
enables copper ion binding IDA
Inferred from Direct Assay
more info
PubMed 
enables copper ion binding IEA
Inferred from Electronic Annotation
more info
 
enables identical protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
enables transcription cis-regulatory region binding IPI
Inferred from Physical Interaction
more info
PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
part_of protein-DNA complex IPI
Inferred from Physical Interaction
more info
PubMed 

General protein information

Preferred Names
DNA-binding transcriptional dual regulator CueR

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    513993..514400
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415020.1 DNA-binding transcriptional dual regulator CueR [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415020.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A1V2G3D4, A0A5B9AKM8
    Conserved Domains (1) summary
    PRK10227
    Location:1135
    PRK10227; HTH-type transcriptional regulator CueR