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fur DNA-binding transcriptional dual regulator Fur [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 945295, updated on 6-May-2021

Summary

Gene symbol
fur
Gene description
DNA-binding transcriptional dual regulator Fur
Primary source
ASAP:ABE-0002327
Locus tag
b0683
See related
ECOCYC:EG10359
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK0671
Summary
Fur translation in coupled to the translation of the upstream leader pepidie Uof; Uof translation is inhibited by the antisense sRNA ryhB; Uof translation opens up a hairpin that blocks Fur translation (Vecerek, 2007). [More information is available at EcoGene: EG10359].
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Genomic context

Sequence:
NC_000913.3 (710200..710646, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene chitobiose outer membrane channel Neighboring gene lipoprotein ChiQ Neighboring gene RyhB-regulated fur leader peptide Neighboring gene flavodoxin 1 Neighboring gene ribbon-helix-helix domain-containing protein YbfE

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by GO

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 
enables DNA-binding transcription activator activity IDA
Inferred from Direct Assay
more info
PubMed 
enables DNA-binding transcription activator activity IPI
Inferred from Physical Interaction
more info
PubMed 
enables DNA-binding transcription factor activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 
enables DNA-binding transcription repressor activity IDA
Inferred from Direct Assay
more info
PubMed 
enables DNA-binding transcription repressor activity IPI
Inferred from Physical Interaction
more info
PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
enables sequence-specific DNA binding IDA
Inferred from Direct Assay
more info
PubMed 
enables sequence-specific DNA binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables transcription cis-regulatory region binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables transcription cis-regulatory region binding IDA
Inferred from Direct Assay
more info
PubMed 
enables transcription cis-regulatory region binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables zinc ion binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables zinc ion binding IDA
Inferred from Direct Assay
more info
PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in cytosol IDA
Inferred from Direct Assay
more info
PubMed 
part_of protein-DNA complex IDA
Inferred from Direct Assay
more info
PubMed 
part_of protein-DNA complex IPI
Inferred from Physical Interaction
more info
PubMed 

General protein information

Preferred Names
DNA-binding transcriptional dual regulator Fur

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    710200..710646 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415209.1 DNA-binding transcriptional dual regulator Fur [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415209.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P0A9A9
    Conserved Domains (1) summary
    PRK09462
    Location:1148
    fur; ferric uptake regulator; Provisional
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