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nagB glucosamine-6-phosphate deaminase [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 945290, updated on 10-Oct-2024

Summary

Official Symbol
nagB
Official Full Name
glucosamine-6-phosphate deaminase
Primary source
ECOCYC:EG10633
Locus tag
b0678
See related
ASAP:ABE-0002304
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK0666; glmD
Summary
Glucosamine-6-phosphate deaminase catalyzes the second cytoplasmic reaction in the metabolism of N-acetyl-D-glucosamine. [More information is available at EcoCyc: EG10633].
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Genomic context

Sequence:
NC_000913.3 (702811..703611, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene DNA-binding transcriptional dual regulator NagC Neighboring gene N-acetylglucosamine-6-phosphate deacetylase Neighboring gene N-acetylglucosamine-specific PTS enzyme IIABC component Neighboring gene glutamine--tRNA ligase

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables glucosamine-6-phosphate deaminase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables glucosamine-6-phosphate deaminase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables glucosamine-6-phosphate deaminase activity IEA
Inferred from Electronic Annotation
more info
 
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
 
enables identical protein binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables identical protein binding IDA
Inferred from Direct Assay
more info
PubMed 
enables protein binding IDA
Inferred from Direct Assay
more info
PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine catabolic process IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within N-acetylglucosamine catabolic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 
involved_in N-acetylneuraminate catabolic process IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in N-acetylneuraminate catabolic process IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within N-acetylneuraminate catabolic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in UDP-N-acetylglucosamine biosynthetic process IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 
involved_in glucosamine catabolic process IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in cytosol IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
glucosamine-6-phosphate deaminase
NP_415204.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    702811..703611 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415204.1 glucosamine-6-phosphate deaminase [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415204.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A2W6PD60, A0A2X1NWT2, A0AAN3KVT3, A0AAN5H722
    Conserved Domains (1) summary
    TIGR00502
    Location:1259
    nagB; glucosamine-6-phosphate isomerase