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ldtA L,D-transpeptidase LdtA [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 945273, updated on 19-Sep-2024

Summary

Official Symbol
ldtA
Official Full Name
L,D-transpeptidase LdtA
Primary source
ECOCYC:G7073
Locus tag
b1990
See related
ASAP:ABE-0006607
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1985; erfK; yeeG; yzzT
Summary
ErfK family. [More information is available at EcoGene: EG12682]. ErfK is an L,D-transpeptidase responsible removal of the D-alanine residue of peptidoglycan tetrapeptide stems and attachment of the lysine residue of Braun lipoprotein to the meso-diaminopimelyl (DAP) residue of the resulting tripeptide. [More information is available at EcoCyc: G7073].
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Genomic context

Sequence:
NC_000913.3 (2062391..2063323, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene DNA-binding transcriptional dual regulator Nac Neighboring gene tRNA-Asn Neighboring gene nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase Neighboring gene cobalamin 5'-phosphate synthase Neighboring gene cobinamide-P guanylyltransferase/cobinamide kinase

Bibliography

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    2062391..2063323 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416494.1 L,D-transpeptidase LdtA [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_416494.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A085P386, A0A3T9KVY3
    Conserved Domains (1) summary
    PRK10190
    Location:1310
    PRK10190; L,D-transpeptidase; Provisional