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rlpA rare lipoprotein RlpA [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 945241, updated on 2-Nov-2019

Summary

Gene symbol
rlpA
Gene description
rare lipoprotein RlpA
Primary source
EcoGene:EG10854
Locus tag
b0633
See related
ASAP:ABE-0002171; ECOCYC:EG10854
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK0626
Summary
First 17 aa are a type II signal peptide. [More information is available at EcoGene: EG10854]. RlpA is one of two (along with RlpB) so-called rare lipoproteins in Escherichia coli. [More information is available at EcoCyc: EG10854].

Genomic context

Sequence:
NC_000913.3 (664102..665190, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene DUF493 domain-containing protein YbeD Neighboring gene D-alanyl-D-alanine carboxypeptidase DacA Neighboring gene SEDS family protein MrdB Neighboring gene peptidoglycan DD-transpeptidase MrdA

Bibliography

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by GO

Function Evidence Code Pubs
lyase activity IEA
Inferred from Electronic Annotation
more info
 
lytic endotransglycosylase activity IEA
Inferred from Electronic Annotation
more info
 
peptidoglycan binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
FtsZ-dependent cytokinesis IGI
Inferred from Genetic Interaction
more info
PubMed 
cell wall organization IEA
Inferred from Electronic Annotation
more info
 
peptidoglycan metabolic process IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
cell outer membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
cell outer membrane IDA
Inferred from Direct Assay
more info
PubMed 
membrane IEA
Inferred from Electronic Annotation
more info
 
plasma membrane IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    664102..665190 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415166.1 rare lipoprotein RlpA [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415166.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P10100
    Conserved Domains (1) summary
    PRK10672
    Location:1362
    PRK10672; rare lipoprotein A; Provisional
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