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citF citrate lyase alpha subunit [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 945230, updated on 17-Dec-2024
Official Symbol
citF
Official Full Name
citrate lyase alpha subunit
Primary source
ECOCYC:G6341
Locus tag
b0615
See related
ASAP:ABE-0002119
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK0608; ybdV
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Sequence:
NC_000913.3 (648039..649571, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene citrate:succinate antiporter Neighboring gene triphosphoribosyl-dephospho-CoA synthase Neighboring gene apo-citrate lyase phosphoribosyl-dephospho-CoA transferase Neighboring gene citrate lyase beta subunit Neighboring gene citrate lyase acyl carrier protein Neighboring gene citrate lyase synthetase

Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Reevaluation of citrate lyase from Escherichia coli. Quentmeier A, et al. Biochim Biophys Acta, 1987 May 27. PMID 3555623
  2. NetPhosBac - a predictor for Ser/Thr phosphorylation sites in bacterial proteins. Miller ML, et al. Proteomics, 2009 Jan. PMID 19053140
  3. CORRELATION OF CITRATE UTILIZATION BY MEMBERS OF THE COLON-AEROGENES GROUP WITH OTHER DIFFERENTIAL CHARACTERISTICS AND WITH HABITAT. Koser SA. J Bacteriol, 1924 Jan. PMID 16559027, Free PMC Article
  4. Why a co-substrate is required for anaerobic growth of Escherichia coli on citrate. Lütgens M, et al. J Gen Microbiol, 1980 Jul. PMID 6997437
  5. SOS response induction by beta-lactams and bacterial defense against antibiotic lethality. Miller C, et al. Science, 2004 Sep 10. PMID 15308764

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

Products Interactant Other Gene Complex Source Pubs Description

Homology

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables citrate (pro-3S)-lyase activity IEA
Inferred from Electronic Annotation
more info
  
enables citrate CoA-transferase activity IEA
Inferred from Electronic Annotation
more info
  
enables lyase activity IEA
Inferred from Electronic Annotation
more info
  
enables transferase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in acetyl-CoA metabolic process IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in acetyl-CoA metabolic process IEA
Inferred from Electronic Annotation
more info
  
involved_in citrate metabolic process IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
part_of ATP-independent citrate lyase complex IEA
Inferred from Electronic Annotation
more info
  
part_of ATP-independent citrate lyase complex IPI
Inferred from Physical Interaction
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
Preferred Names
citrate lyase alpha subunit
NP_415148.1

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    648039..649571 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415148.1 citrate lyase alpha subunit [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415148.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8S7EIK6, A0AAN3KNQ5
    Conserved Domains (1) summary
    COG3051
    Location:1 → 510
    CitF; Citrate lyase, alpha subunit [Energy production and conversion]
Nucleotide Protein
Heading Accession and Version

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