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sfmD putative fimbrial usher protein SfmD [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 945160, updated on 11-Oct-2018

Summary

Gene symbol
sfmD
Gene description
putative fimbrial usher protein SfmD
Primary source
EcoGene:EG13883
Locus tag
b0532
See related
ASAP:ABE-0001830; ECOCYC:G6292
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK0525
Summary
FimD family. [More information is available at EcoGene: EG13883]. SfmD is an uncharacterized protein. [More information is available at EcoCyc: G6292].

Genomic context

Sequence:
NC_000913.3 (559697..562300)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative fimbrial protein SfmA Neighboring gene putative fimbrial chaperone SfmC Neighboring gene putative fimbrial adhesin protein SfmH Neighboring gene putative fimbrial protein SfmF

General gene information

Gene Ontology Provided by GO

Function Evidence Code Pubs
fimbrial usher porin activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
fimbrial usher porin activity ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
Process Evidence Code Pubs
pilus assembly IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
pilus organization IMP
Inferred from Mutant Phenotype
more info
PubMed 
pilus organization ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
Component Evidence Code Pubs
cell outer membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
cell outer membrane ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 

General protein information

Preferred Names
putative fimbrial usher protein SfmD

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    559697..562300
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415065.1 putative fimbrial usher protein SfmD [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415065.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P77468
    Conserved Domains (1) summary
    PRK15198
    Location:10867
    PRK15198; outer membrane usher protein FimD; Provisional
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