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ydgI putative arginine:ornithine antiporter [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 945159, updated on 4-Apr-2024

Summary

Gene symbol
ydgI
Gene description
putative arginine:ornithine antiporter
Primary source
ASAP:ABE-0005362
Locus tag
b1605
See related
ECOCYC:G6861
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
arcD; ECK1600
Summary
ArcD is an uncharacterized member of the APC family of amino acid transporters. arcD is similar to the arcD gene of Pseudomonas aeruginosa wich encodes an arginine:ornithine antiporter . [More information is available at EcoCyc: G6861].
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Genomic context

Sequence:
NC_000913.3 (1679557..1680939)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene pyridine nucleotide transhydrogenase subunit alpha Neighboring gene DUF1471 domain-containing protein YdgH Neighboring gene dihydromonapterin reductase Neighboring gene GlpM family protein Neighboring gene DNA-binding transcriptional regulator RstA

General gene information

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables antiporter activity IEA
Inferred from Electronic Annotation
more info
 
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in amino acid transport IEA
Inferred from Electronic Annotation
more info
 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 
located_in plasma membrane ISM
Inferred from Sequence Model
more info
PubMed 

General protein information

Preferred Names
putative arginine:ornithine antiporter

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1679557..1680939
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416122.1 putative arginine:ornithine antiporter [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_416122.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A418GGC6, A0A5B9AIM2
    Conserved Domains (1) summary
    TIGR00905
    Location:3460
    2A0302; transporter, basic amino acid/polyamine antiporter (APA) family