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tauD taurine dioxygenase [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 945021, updated on 27-Nov-2023

Summary

Gene symbol
tauD
Gene description
taurine dioxygenase
Primary source
ASAP:ABE-0001263
Locus tag
b0368
See related
ECOCYC:EG12423
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK0365; ssiD; yaiG
Summary
Escherichia coli can utilize aliphatic sulfonates as sulfur sources for growth. [More information is available at EcoCyc: EG12423].
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Genomic context

Sequence:
NC_000913.3 (387795..388646)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene taurine ABC transporter periplasmic binding protein Neighboring gene taurine ABC transporter ATP binding subunit Neighboring gene taurine ABC transporter membrane subunit Neighboring gene porphobilinogen synthase Neighboring gene pseudo Neighboring gene protein YtiB

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables L-ascorbic acid binding IEA
Inferred from Electronic Annotation
more info
 
enables dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 
enables ferrous iron binding IDA
Inferred from Direct Assay
more info
PubMed 
enables identical protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 
enables taurine dioxygenase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables taurine dioxygenase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables taurine dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within protein homotetramerization IPI
Inferred from Physical Interaction
more info
PubMed 
involved_in sulfur compound metabolic process IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within sulfur compound metabolic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in taurine catabolic process IDA
Inferred from Direct Assay
more info
PubMed 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
part_of taurine dioxygenase complex IDA
Inferred from Direct Assay
more info
PubMed 
part_of taurine dioxygenase complex IPI
Inferred from Physical Interaction
more info
PubMed 

General protein information

Preferred Names
taurine dioxygenase
NP_414902.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    387795..388646
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_414902.1 taurine dioxygenase [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_414902.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A828PIH6, F4UYX4
    Conserved Domains (1) summary
    PRK09553
    Location:3279
    tauD; taurine dioxygenase; Reviewed