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pepD peptidase D [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 945013, updated on 6-May-2021

Summary

Gene symbol
pepD
Gene description
peptidase D
Primary source
ASAP:ABE-0000809
Locus tag
b0237
See related
ECOCYC:EG10695
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK0238; pepH
Summary
CsgD regulon, repressed. [More information is available at EcoGene: EG10695]. Peptidase D is a dipeptidase capable of breaking down a number of dipeptides with unblocked N termini, including cysteinylglycine . [More information is available at EcoCyc: EG10695].
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Genomic context

Sequence:
NC_000913.3 (254259..255716, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative acyltransferase with acyl-CoA N-acyltransferase domain Neighboring gene pseudo Neighboring gene pseudo Neighboring gene xanthine-guanine phsophoribosyltransferase Neighboring gene fermentation-respiration switch protein

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by GO

Function Evidence Code Pubs
enables alanylglutamate dipeptidase activity IEA
Inferred from Electronic Annotation
more info
 
enables dipeptidase activity IEA
Inferred from Electronic Annotation
more info
 
enables dipeptidase activity IMP
Inferred from Mutant Phenotype
more info
PubMed 
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
enables metallodipeptidase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables metallodipeptidase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables metallopeptidase activity IEA
Inferred from Electronic Annotation
more info
 
enables peptidase activity IEA
Inferred from Electronic Annotation
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables zinc ion binding IDA
Inferred from Direct Assay
more info
PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within peptide catabolic process IGI
Inferred from Genetic Interaction
more info
PubMed 
acts_upstream_of_or_within proteolysis IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in cytosol IDA
Inferred from Direct Assay
more info
PubMed 

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    254259..255716 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_414772.1 peptidase D [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_414772.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P15288
    Conserved Domains (1) summary
    PRK15026
    Location:1485
    PRK15026; aminoacyl-histidine dipeptidase; Provisional
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