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codA cytosine/isoguanine deaminase [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 944996, updated on 6-May-2021

Summary

Gene symbol
codA
Gene description
cytosine/isoguanine deaminase
Primary source
ASAP:ABE-0001161
Locus tag
b0337
See related
ECOCYC:EG11326
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK0334
Summary
Earlier characterization of the enzyme had found it to consist of two polypeptides of different molecular mass. [More information is available at EcoCyc: EG11326].
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Genomic context

Sequence:
NC_000913.3 (356171..357454)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene 2-methylcitrate dehydratase Neighboring gene propionyl-CoA synthetase Neighboring gene cytosine transporter Neighboring gene DNA-binding transcriptional dual regulator CynR Neighboring gene carbonic anhydrase 1

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by GO

Function Evidence Code Pubs
enables 5-fluorocytosine deaminase activity IEA
Inferred from Electronic Annotation
more info
 
enables cytosine deaminase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables cytosine deaminase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables cytosine deaminase activity IEA
Inferred from Electronic Annotation
more info
 
enables ferrous iron binding IDA
Inferred from Direct Assay
more info
PubMed 
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
 
enables hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEA
Inferred from Electronic Annotation
more info
 
enables hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables identical protein binding IDA
Inferred from Direct Assay
more info
PubMed 
enables identical protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables isoguanine deaminase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables isoguanine deaminase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
enables zinc ion binding IDA
Inferred from Direct Assay
more info
PubMed 
Process Evidence Code Pubs
involved_in cytosine catabolic process IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
acts_upstream_of_or_within cytosine catabolic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within cytosine metabolic process IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
cytosine/isoguanine deaminase
NP_414871.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    356171..357454
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_414871.1 cytosine/isoguanine deaminase [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_414871.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P25524
    Conserved Domains (1) summary
    PRK09230
    Location:2427
    PRK09230; cytosine deaminase; Provisional
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